Publications

Open Access/Publications

All peer-reviewed scientific publications that stem from EPIC-XS project activities must provide open access.

 

Guidelines on Open Access Guidelines to to Scientific Publications and Open Access to Research Data in Horizon 2020 are available here:   Guidelines on open access

 

Make sure that all publications resulting from EPIC-XS properly acknowledge the project and the Horizon 2020 funding:

 

“This work has been supported by EPIC-XS, project number 823839, funded by the Horizon 2020 programme of the European Union.”

 

Publications:

1:Oncogenic Mutations Rewire Signaling Pathways by Switching Protein Recruitment to Phosphotyrosine Sites, Lundby, Alicia; Franciosa, Giulia ; Emdal, Kristina B.; Refsgaard, Jan C.;Gnosa, Sebastian P.;Bekker-Jensen, Dorte B.; Secher, Anna ;Maurya, Svetlana R.; Paul, Indranil; Mendez, Blanca L.; Kelstrup, Christian D.; Francavilla, Chiara ; Kveiborg, Marie ; Montoya, Guillermo; Jensen, Lars J. ; Olsen, Jesper V. CELL, Volume: 179; Issue: 2;Pages: 543-+ [PubMed] DOI: 10.1016/j.cell.2019.09.008

2: PhoX: An IMAC-Enrichable Cross-Linking Reagent, Steigenberger, Barbara; Pieters, Roland J. ; Heck, Albert J. R. ; Scheltema, Richard A.

ACS Cent. Sci.; Sep 25;5(9):1514-1522.; [PubMed] DOI: 10.1021/acscentsci.9b00416

3: Structure of the inner kinetochore CCAN complex assembled onto a centromeric nucleosome, Kaige Yan, Jing Yang, Ziguo Zhang, Stephen H. McLaughlin, Leifu Chang,Domenico Fasci, Ann E. Ehrenhofer-Murray, Albert J. R. Heck  David Barford, Nature 2019 Oct 2. [PubMed] DOI: 10.1038/s41586-019-1609-1

4: Cross-ID: Analysis and Visualization of Complex XL−MS-Driven, Protein Interaction Networks, Sebastiaan C. de Graaf, Oleg Klykov, Henk van den Toorn and Richard A. Scheltema, J. Proteome Res. 2019, 18, 642−651, [PubMed], DOI:10.1021/acs.jproteome.8b0072

5: A Colorful Pallet of B-Phycoerythrin Proteoforms Exposed by a Multimodal Mass Spectrometry Approach; Tamara, S., Hoek, M., Scheltema, RA, Leney AC., Heck, AJR, CHEM 2019, Vol 5, Issue 5, 1302-1317, [Science Direct] DOI 0.1016/j.chempr.2019.03.006 
6: Quantifying the impact of public omics data, Perez-Riverol, Yasset; Zorin, Andrey; Dass, Gaurhari; Manh-Tu Vu; Xu, Pan; Glont, Mihai; Vizcaino, Juan Antonio; Jarnuczak, Andrew F.; Petryszak, Robert; Ping, Peipei; Hermjakob, Henning; Nature Communications,Vol.10, Article no., 3512, [PubMed] DOI: 10.1038/s41467-019-11461-w
7: Updated (MSPIP)-P-2 web server delivers fast and accurate MS2 peak intensity prediction for multiple fragmentation methods, instruments and labeling techniques, Gabriels, Ralf; Martens, Lennart; Degroeve, Sven; Nucleic Acids Res., Vol. 47,W1,W295-W299, [PubMed] DOI: 10.1093/nar/gkz299
8: N-terminal beta-strand underpins biochemical specialization of an ATG8 isoform, Zess, Erin K.; Jensen, Cassandra; Cruz-Mireles Neftaly; De la Concepcion, Juan Carlos; Sklenar, Jan; Stephani, Madlen; Imre, Richard; Roitinger, Elisabeth; Hughes, Richard; Belhaj, Khaoula; Mechtler, Karl; Menke, Frank L. H.;Bozkurt, Tolga; Banfield, Mark J.;Kamoun, Sophien; Maqbool, Abbas; Dagdas, Yasin F.; Plos Biology, Vol.17, 7, Art. No. e3000373, [PubMed] DOI: 10.1371/journal.pbio.3000373
9: Absolute quantification of cohesin, CTCF and their regulators in human cells, Holzmann, Johann; Politi, Antonio Z.;Nagasaka, Kota;Hantsche-Grininger, Merle;Walther, Nike;Koch, Birgit;Fuchs, Johannes;Duernberger, Gerhard;Tang, Wen;Ladurner, Rene;Stocsits, Roman R.;Busslinger, Georg A.;Novak, Bela;Mechtler, Karl;Davidson, Iain Finley;Ellenberg, Jan;Peters, Jan-Michael; ELIFE, Vol.8, Art. No. e46269, [PubMed] DOI: 10.7554/eLife.46269
10: Isotopologue Multipoint Calibration for Proteomics Biomarker Quantification in Clinical Practice, Chiva, Cristina; Pastor, Olga); Trilla-Fuertes, Lucia; Gamez-Pozo, Angelo ;Fresno Vara, Juan Angel; Sabido, Eduard, Anal. Chem., Vol 91, 8, 4934-4938, [PubMed] DOI: 10.1021/acs.analchem.8b05802

11: Phosphopeptide Fragmentation and Site Localization by Mass Spectrometry: An Update, Potel, Clement M.; Lemeer, Simone; Heck, Albert J. R., Anal. Chem., Vol. 91, 1, 126-141, [PubMed] DOI: 10.1021/acs.analchem.8b04746

EC-Funded Initiative

OpenAIRE, is an EC funded initative designed to promote the open access policies of the EC and helps researchers, research officers and project coordinators comply with them.

EPIC-XS has its own page on OpenAIRE (EPIC-XS OpenAIRE), featuring project information, related project publications and datasets, and a statistics section. This information can be freely used for reporting purposes, generating tailor-made publication lists and statistics.